Ellingson, Sally R.: search on Z-Library

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1

Development of tools for the automated analysis of spectra generated by tandem mass spectrometry

Sally Ellingson, Joe Hughes, Dylan Storey, Rick Weber, Nathan VerBerkmoes

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 141 KB

english, 2010

2

VinaMPI: Facilitating multiple receptor high-throughput virtual docking on high-performance computers

Ellingson, Sally R., Smith, Jeremy C., Baudry, Jerome

Journal:

Journal of Computational Chemistry

Year:

2013

Language:

english

File:

PDF, 1.04 MB

english, 2013

3

Convex-hull voting method on a large data set

Sally R Ellingson,Chi Wang,Radhakrishnan Nagarajan

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 268 KB

english, 2015

4

Using large public data repositories to discover novel genetic mutations with prospective links to melanoma

Tamas S Gal,Sally R Ellingson,Chi Wang,Jinpeng Liu…

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 722 KB

english, 2015

5

Ensemble Docking in Drug Discovery: How Many Protein Configurations from Molecular Dynamics Simulations Are Needed to Reproduce Known Ligand Binding?

Evangelista, Wilfredo, Ellingson, Sally Rose, Smith, Jeremy C., Baudry, Jerome Yves

Journal:

Journal of Physical Chemistry B

Year:

2019

File:

PDF, 375 KB

2019

6

Ensemble-based docking: From hit discovery to metabolism and toxicity predictions

Evangelista, Wilfredo, Weir, Rebecca L., Ellingson, Sally R., Harris, Jason B., Kapoor, Karan, Smith, Jeremy C., Baudry, Jerome

Journal:

Bioorganic & Medicinal Chemistry

Year:

2016

Language:

english

File:

PDF, 1.30 MB

english, 2016

7

Gene-based association study of genes linked to hippocampal sclerosis of aging neuropathology: GRN , TMEM106B , ABCC9 , and KCNMB2

Katsumata, Yuriko, Nelson, Peter T., Ellingson, Sally R., Fardo, David W.

Journal:

Neurobiology of Aging

Year:

2017

Language:

english

File:

PDF, 591 KB

english, 2017

8

Towards a better understanding of on and off target effects of the lymphocyte-specific kinase LCK for the development of novel and safer pharmaceuticals

Zhang, Xiaofei, Kucharski, Amir, de Jong, Wibe A., Ellingson, sally R.

Journal:

Procedia Computer Science

Year:

2017

Language:

english

File:

PDF, 1.92 MB

english, 2017

9

Serendipitous discoveries in microarray analysis

Sally R Ellingson, Charles A Phillips, Randy Glenn, Douglas Swanson, Thomas Ha, Daniel Goldowitz, Michael A Langston

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 149 KB

english, 2010

10

Computationally Characterizing Genomic Pipelines Using High-confident Call Sets

Zhang, Xiaofei, Ellingson, Sally R.

Journal:

Procedia Computer Science

Year:

2016

Language:

english

File:

PDF, 366 KB

english, 2016

11

Genetic Comparison of Symptomatic and Asymptomatic Persons With Alzheimer Disease Neuropathology

Monsell, Sarah E., Mock, Charles, Fardo, David W., Bertelsen, Sarah, Cairns, Nigel J., Roe, Catherine M., Ellingson, Sally R., Morris, John C., Goate, Alison M., Kukull, Walter A.

Journal:

Alzheimer Disease & Associated Disorders

Year:

2016

Language:

english

File:

PDF, 162 KB

english, 2016

12

High-throughput virtual molecular docking with AutoDockCloud

Sally R. Ellingson, Jerome Baudry

Journal:

Concurrency and Computation: Practice and Experience

Year:

2012

Language:

english

File:

PDF, 311 KB

english, 2012

13

Accelerating virtual high-throughput ligand docking: current technology and case study on a petascale supercomputer

Ellingson, Sally R., Dakshanamurthy, Sivanesan, Brown, Milton, Smith, Jeremy C., Baudry, Jerome

Journal:

Concurrency and Computation: Practice and Experience

Year:

2014

Language:

english

File:

PDF, 447 KB

english, 2014

14

[ACM Press the 3rd international workshop - Delft, The Netherlands (2012.06.18-2012.06.18)] Proceedings of the 3rd international workshop on Emerging computational methods for the life sciences - ECMLS '12 - Accelerating virtual high-throughput ligand docking

Ellingson, Sally R., Dakshanamurthy, Sivanesan, Brown, Milton, Smith, Jeremy C., Baudry, Jerome

Year:

2012

Language:

english

File:

PDF, 432 KB

english, 2012

15

Machine learning and ligand binding predictions: A review of data, methods, and obstacles

Ellingson, Sally R., Davis, Brian, Allen, Jonathan

Journal:

Biochimica et Biophysica Acta (BBA) - General Subjects

Year:

2020

File:

PDF, 1.23 MB

2020

16

Detection of Viable Mycobacterium avium subsp. paratuberculosis in Retail Pasteurized Whole Milk by Two Culture Methods and PCR

ELLINGSON, JAY L. E., ANDERSON, JENNIFER L., KOZICZKOWSKI, JEFF J., RADCLIFF, ROY P., SLOAN, SALLY J., ALLEN, SARA E., SULLIVAN, NADINE M.

Journal:

Journal of Food Protection

Year:

2005

Language:

english

File:

PDF, 61 KB

english, 2005

17

Characterization of Squamous Cell Lung Cancers from Appalachian Kentucky

Liu, Jinpeng, Murali, Thilakam, Yu, Tianxin, Liu, Chunming, Sivakumaran, Theru A, Moseley, Hunter N.B., Zhulin, Igor B., Weiss, Heidi L., Durbin, Eric B., Ellingson, Sally R, Liu, Jinze, Huang, Bin, H

Journal:

Cancer Epidemiology Biomarkers & Prevention

Year:

2018

Language:

english

File:

PDF, 1.42 MB

english, 2018

18

[ACM Press the second international workshop - San Jose, California, USA (2011.06.08-2011.06.08)] Proceedings of the second international workshop on Emerging computational methods for the life sciences - ECMLS '11 - High-throughput virtual molecular docking

Ellingson, Sally R., Baudry, Jerome

Year:

2011

Language:

english

File:

PDF, 515 KB

english, 2011

19

Polypharmacology and supercomputer-based docking: opportunities and challenges

Ellingson, Sally R., Smith, Jeremy C., Baudry, Jerome

Journal:

Molecular Simulation

Year:

2014

Language:

english

File:

PDF, 203 KB

english, 2014

20

Reassessment of Risk Genotypes (GRN, TMEM106B, and ABCC9 Variants) Associated With Hippocampal Sclerosis of Aging Pathology

Nelson, Peter T., Wang, Wang-Xia, Partch, Amanda B., Monsell, Sarah E., Valladares, Otto, Ellingson, Sally R., Wilfred, Bernard R., Naj, Adam C., Wang, Li-San, Kukull, Walter A., Fardo, David W.

Journal:

Journal of Neuropathology and Experimental Neurology

Year:

2015

Language:

english

File:

PDF, 1.53 MB

english, 2015

21

Ammonia permeability of the soybean nodulin 26 channel

Jin Ha Hwang, Sally R. Ellingson, Daniel M. Roberts

Journal:

Year:

2010

Language:

english

File:

PDF, 403 KB

english, 2010

22

Multi-Conformer Ensemble Docking to Difficult Protein Targets

Ellingson, Sally R., Miao, Yinglong, Baudry, Jerome, Smith, Jeremy C.

Journal:

Journal of Physical Chemistry B

Year:

2015

Language:

english

File:

PDF, 1.96 MB

english, 2015

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